"The team management and the rider were both totally surprised by this
physiological result," Phonak added.
"The rider will ask in the upcoming days for the counter analysis to prove
either that this result has come from a natural process or that this is the
result of a mistake," the statement read.
Landis pulled out of races in the last two days without giving any
explanation and organisers of those events were unable to contact him.
Dutch news agency ANP quoted his team mate Koos Moerenhout as saying that
Landis had pain from a hip problem and had gone gone to see his doctor in
Germany.
The UCI announced on Wednesday a rider had tested positive during this year's
race. The ruling body did not name the rider or give further details.
DOPING SCANDAL
This year's Tour was hit by a doping scandal on the eve of the opening
prologue.
Giro d'Italia winner Ivan Basso of Italy and Germany's 1997 Tour champion Jan
Ullrich were forced to pull out and were suspended after being implicated in a
doping investigation in Spain. The pair denied any wrong-doing.
Ullrich was later sacked by his T-Mobile sponsor while team mate Oscar
Sevilla and manager Rudy Pevenage were suspended.
The Astana-Wuerth team had to withdraw as five of their riders were on a list
of nine Tour competitors provided by Spanish police in the biggest doping
scandal since the Festina affair which rocked the 1998 race.
The investigation came to light in May when the Spanish Civil Guard raided
addresses in Madrid and Zaragoza and found large quantities of anabolic
steroids, equipment used for blood transfusions and more than 100 bags of frozen
blood.
A notoriously tough sport, cycling has been plagued by doping for years.
Landis's win had been welcomed by observers, who said it lifted some of the
gloom hanging over the event after its traumatic start.
Asked if he had a message to deliver about doping after his victory, Landis
had said: "In this sport, we proved that more than any sport we try to prevent
doping and try to solve the problem.
However, he added: "Cycling has a reputation that doesn't seem to want to go
away."